CSC8312 -- Bioinformatics Theory and Applications

ID   AF457141; SV 1; linear; mRNA; STD; MUS; 982 BP.
XX
AC   AF457141;
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DT   24-JAN-2002 (Rel. 70, Created)
DT   23-SEP-2008 (Rel. 97, Last updated, Version 4)
XX
DE   Mus musculus Pax6 paired-less isoform mRNA, complete cds.
XX
KW   .
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
XX
RN   [1]
RP   1-982
RX   DOI; 10.1016/S0003-2697(02)00244-0
RX   PUBMED; 12419357.
RA   Gorlov I.P., Saunders G.F.;
RT   "A method for isolating alternatively spliced isoforms: isolation of murine
RT   Pax6 isoforms";
RL   Anal. Biochem. 308(2):401-404(2002).
XX
RN   [2]
RP   1-982
RA   Gorlov I.P., Saunders G.F.;
RT   ;
RL   Submitted (10-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Department of Biochemistry, The University of Texas M.D. Anderson Cancer
RL   Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA
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DR   ASTD; TRAN00000143171.
DR   Ensembl-Gn; ENSMUSG00000027168; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000016435; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000037848; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000090391; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000090397; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111078; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111082; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111083; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111084; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111085; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111086; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111087; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000111088; Mus_musculus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..982
FT                   /organism="Mus musculus"
FT                   /chromosome="2"
FT                   /strain="C57BL/6"
FT                   /mol_type="mRNA"
FT                   /tissue_type="eye"
FT                   /db_xref="taxon:10090"
FT   CDS             210..875
FT                   /codon_start=1
FT                   /product="Pax6 paired-less isoform"
FT                   /note="driven by P0 promoter"
FT                   /db_xref="GOA:Q8VBX9"
FT                   /db_xref="HSSP:P06601"
FT                   /db_xref="InterPro:IPR001356"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="MGI:97490"
FT                   /db_xref="UniProtKB/TrEMBL:Q8VBX9"
FT                   /protein_id="AAL67742.1"
FT                   /translation="MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAK
FT                   IDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTP
FT                   VSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSV
FT                   NGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ"
XX
SQ   Sequence 982 BP; 283 A; 277 C; 238 G; 184 T; 0 other;
     ttaaactctg ggcaggtcct cgcgtagaac ccggttgtca gatctgctac ttccccccga        60
     gaagcggctt tgagaagtgt gggaaccagc gccaccagac tcacctgaca ccccagcctc       120
     ggctcacaga tggctgccag caacaggaag gagggggaga gaacaccaac tccatcagtt       180
     ctaacggaga agactcggat gaagctcaga tgcgacttca gctgaagcgg aagctgcaaa       240
     gaaatagaac atcttttacc caagagcaga ttgaggctct ggagaaagag tttgagagga       300
     cccattatcc agatgtgttt gcccgggaaa gactagcagc caaaatagat ctacctgaag       360
     caagaataca ggtatggttt tctaatcgaa gggccaaatg gagaagagaa gagaaactga       420
     ggaaccagag aagacaggcc agcaacactc ctagtcacat tcctatcagc agcagcttca       480
     gtaccagtgt ctaccagcca atcccacagc ccaccacacc tgtctcctcc ttcacatcag       540
     gttccatgtt gggccgaaca gacaccgccc tcaccaacac gtacagtgct ttgccaccca       600
     tgcccagctt caccatggca aacaacctgc ctatgcaacc cccagtcccc agtcagacct       660
     cctcatactc gtgcatgctg cccaccagcc cgtcagtgaa tgggcggagt tatgatacct       720
     acacccctcc gcacatgcaa acacacatga acagtcagcc catgggcacc tcggggacca       780
     cttcaacagg actcatttca cctggagtgt cagttcccgt ccaagttccc gggagtgaac       840
     ctgacatgtc tcagtactgg cctcgattac agtaaagaga gaaggagaga gcatgtgatc       900
     gagagaggaa attgtgttca ctctgccaat gactatgtgg acacagcagt tgggtattca       960
     ggaaagaaag agaaatggcg gt                                                982
//