Package uk.ac.man.bioinf.gui.viewer

Interface Summary

AlignmentSelectionModel	AlignmentSelectionModel.java This defines the selection model for the JAlignmentViewer.
AlignmentSelectionRenderer	SelectionRenderer.java Created: Wed Mar 7 18:45:50 2001
AlignmentViewerCellRenderer	AlignmentViewerCellRenderer.java Initial interface for the AlignmentViewerCellRender.
FastAlignmentViewerCellRenderer	FastAlignmentViewerCellRenderer.java Although the JAlignmentViewer provides a pluggable renderer architecture with the AlignmentViewerCellRenderer it has been found that this has a fairly disasterous effect on performance of the viewer particularly with respect to scrolling, due to the large number of method calls and events to render a cell.
SequenceCursor	SequenceCursor.java Created: Mon Apr 3 18:59:26 2000

Class Summary

BorderFastAlignmentViewerCellRenderer	BorderFastAlignmentViewerCellRenderer.java One of three classes designed to render cells in the JAlignmentViewer.
ButtonViewerPopupMenu	ButtonViewerPopupMenu.java This class implements a pop up menu for the JAlignmentButtonPanel.
ColorFastAlignmentViewerCellRenderer	ColorFastAlignmentViewerCellRenderer.java One of three classes designed to render cells in the JAlignmentViewer.
CursorLessFastAlignmentViewerCellRenderer	CursorLessFastAlignmentViewerCellRenderer.java Created: Thu Jul 13 17:59:36 2000
DefaultAlignmentSelectionRenderer	DefaultAlignmentSelectionRenderer.java Created: Wed Mar 7 18:59:56 2001
DefaultAlignmentViewerCellRenderer	DefaultAlignmentViewerCellRenderer.java Created: Mon Mar 20 20:23:12 2000
DefaultFastAlignmentViewerCellRenderer	DefaultFastAlignmentViewerCellRenderer.java Created: Mon Apr 17 20:11:46 2000
DefaultSequenceCursor	DefaultSequenceCursor.java Created: Tue Apr 4 12:49:30 2000
Install	Install.java This class provides the install information for the all of the classes in the viewer package.
InvertedScrollPaneLayout	InvertedScrollPaneLayout.java Created: Fri Mar 31 14:27:41 2000
JAlignmentButtonPanel	JAlignmentButtonPanel.java This component provides a rank of Buttons relating to a SequenceAlignment.
JAlignmentRuler	JAlignmentRuler.java Created: Thu Mar 23 12:33:50 2000
JAlignmentViewer	JAlignmentViewer.java Created: Tue Mar 14 16:28:59 2000
JChangedScrollPane	JChangedScrollPane.java Created: Fri Mar 31 14:56:45 2000
JLayableScrollPane	JLayableScrollPane.java You cant reset the layout manager on a scroll pane, due to what appears to be a bug in the JScrollPane layout, at least not it you want anything to appear on screen.
MultiplexerFastAlignmentViewerCellRenderer	MultiplexerFastAlignmentViewerCellRenderer.java This multiplexer uses three other cell renderers to render the cell.
NullAlignmentSelectionModel	NullAlignmentSelectionModel.java Trivial selection model.
PrintableAlignmentPanel	PrintableAlignmentPanel.java Created: Fri Mar 9 20:00:24 2001
PrintableJAlignmentViewer	PrintableJAlignmentViewer.java A JAlignmentViewer which can be used to print Created: Fri Mar 9 17:21:44 2001
SingleAlignmentSelectionModel	SingleAlignmentSelectionModel.java Created: Mon Apr 10 11:59:44 2000
TextFastAlignmentViewerCellRenderer	TextFastAlignmentViewerCellRenderer.java One of three classes designed to render cells in the JAlignmentViewer.

Exception Summary

ReadonlyException

ReadonlyException.java Created: Thu Dec 14 15:40:59 2000