uk.ac.man.bioinf.apps.cinema.color
Class CinemaColorFactory

java.lang.Object
  |
  +--uk.ac.man.bioinf.module.Module
        |
        +--uk.ac.man.bioinf.apps.xml.XMLModule
              |
              +--uk.ac.man.bioinf.apps.cinema.CinemaModule
                    |
                    +--uk.ac.man.bioinf.apps.cinema.color.CinemaColorFactory

All Implemented Interfaces:

AlignmentEventProvider

public class CinemaColorFactory

extends CinemaModule

CinemaColorFactory.java Created: Fri Feb 9 11:49:21 2001

Version:

$Id: CinemaColorFactory.java,v 1.5 2002/03/08 14:49:27 lord Exp $

Author:

Phillip Lord

Constructor Summary

CinemaColorFactory()

Method Summary

void	addMetaData(ColorMapMetaData colorMap)
Iterator	getColorMapIterator()
ColorMapMetaData	getDefaultColorMapMetaData()
ColorMapMetaData	getMetaData(ColorMap map) Returns a meta data object for the given ColorMap.
ColorMapMetaData	getMetaData(String name)
ModuleIdentifierList	getRequiredIdentifiers() Returns the module identifiers for the required modules.
int	getSize()
String	getVersion() Returns the version of this module.
void	start() The method called externally to initiate the modules function.

Methods inherited from class uk.ac.man.bioinf.apps.cinema.CinemaModule

addAlignmentListener, addCinemaPropertyChangeListener, addCinemaPropertyChangeListener, addVetoableAlignmentListener, clearSequenceTitleColor, destroy, fireCinemaPropertyChange, getAlignmentSelectionModel, getColorMap, getSequenceAlignment, removeAlignmentListener, removeCinemaPropertyChangeListener, removeCinemaPropertyChangeListener, removeVetoableAlignmentListener, sendStatusMessage, setAlignmentSelectionModel, setColorMap, setSequenceAlignment, setSequenceTitleColor

Methods inherited from class uk.ac.man.bioinf.apps.xml.XMLModule

getConfigProperties, getConfigTree

Methods inherited from class uk.ac.man.bioinf.module.Module

addPropertyChangeListener, addPropertyChangeListener, finalize, firePropertyChange, firePropertyChange, firePropertyChange, getContext, getIdentifier, getRequiredModule, getRequiredModules, hasListeners, isDestroyed, isStarted, load, removePropertyChangeListener, removePropertyChangeListener, runStart, setContext

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CinemaColorFactory

public CinemaColorFactory()

Method Detail

start

public void start()

Description copied from class: Module

The method called externally to initiate the modules function.

Overrides:

start in class Module

addMetaData

public void addMetaData(ColorMapMetaData colorMap)

getMetaData

public ColorMapMetaData getMetaData(ColorMap map)

Returns a meta data object for the given ColorMap.

Parameters:

map -

Returns:

getMetaData

public ColorMapMetaData getMetaData(String name)

getColorMapIterator

public Iterator getColorMapIterator()

getSize

public int getSize()

getDefaultColorMapMetaData

public ColorMapMetaData getDefaultColorMapMetaData()

getVersion

public String getVersion()

Description copied from class: Module

Returns the version of this module.

Specified by:

getVersion in class Module

Returns:

the version

getRequiredIdentifiers

public ModuleIdentifierList getRequiredIdentifiers()

Description copied from class: Module

Returns the module identifiers for the required modules. This places a call on getRequiredModules, which is delegated to the module context. It may require over-riding inorder to improve the efficiency of the method.

Overrides:

getRequiredIdentifiers in class CinemaModule

Returns:

the required module identifiers