uk.ac.man.bioinf.apps.cinema.motif
Class CinemaMotifModule

java.lang.Object
  |
  +--uk.ac.man.bioinf.module.Module
        |
        +--uk.ac.man.bioinf.apps.xml.XMLModule
              |
              +--uk.ac.man.bioinf.apps.cinema.CinemaModule
                    |
                    +--uk.ac.man.bioinf.apps.cinema.motif.CinemaMotifModule
All Implemented Interfaces:
AlignmentEventProvider, CinemaActionProvider

public class CinemaMotifModule
extends CinemaModule
implements CinemaActionProvider

CinemaMotifModule.java This module is designed to handle motif selection and viewing within Cinema. Created: Wed Dec 27 14:57:33 2000

Version:
$Id: CinemaMotifModule.java,v 1.5 2001/05/29 13:06:07 lord Exp $
Author:
Phillip Lord

Constructor Summary
CinemaMotifModule()
           
 
Method Summary
 Action[] getActions()
           
 ModuleIdentifierList getRequiredIdentifiers()
          Returns the module identifiers for the required modules.
 String getVersion()
          Returns the version of this module.
 void start()
          The method called externally to initiate the modules function.
 
Methods inherited from class uk.ac.man.bioinf.apps.cinema.CinemaModule
addAlignmentListener, addCinemaPropertyChangeListener, addCinemaPropertyChangeListener, addVetoableAlignmentListener, clearSequenceTitleColor, destroy, fireCinemaPropertyChange, getAlignmentSelectionModel, getColorMap, getSequenceAlignment, removeAlignmentListener, removeCinemaPropertyChangeListener, removeCinemaPropertyChangeListener, removeVetoableAlignmentListener, sendStatusMessage, setAlignmentSelectionModel, setColorMap, setSequenceAlignment, setSequenceTitleColor
 
Methods inherited from class uk.ac.man.bioinf.apps.xml.XMLModule
getConfigProperties, getConfigTree
 
Methods inherited from class uk.ac.man.bioinf.module.Module
addPropertyChangeListener, addPropertyChangeListener, finalize, firePropertyChange, firePropertyChange, firePropertyChange, getContext, getIdentifier, getRequiredModule, getRequiredModules, hasListeners, isDestroyed, isStarted, load, removePropertyChangeListener, removePropertyChangeListener, runStart, setContext
 
Methods inherited from class java.lang.Object
clone, equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

CinemaMotifModule

public CinemaMotifModule()
Method Detail

start

public void start()
Description copied from class: Module
The method called externally to initiate the modules function.

Overrides:
start in class Module

getActions

public Action[] getActions()
Specified by:
getActions in interface CinemaActionProvider

getVersion

public String getVersion()
Description copied from class: Module
Returns the version of this module.

Specified by:
getVersion in class Module
Returns:
the version

getRequiredIdentifiers

public ModuleIdentifierList getRequiredIdentifiers()
Description copied from class: Module
Returns the module identifiers for the required modules. This places a call on getRequiredModules, which is delegated to the module context. It may require over-riding inorder to improve the efficiency of the method.

Overrides:
getRequiredIdentifiers in class CinemaModule
Returns:
the required module identifiers