uk.ac.man.bioinf.apps.cinema.color
Class WhiteColorMapMetaData

java.lang.Object
  |
  +--uk.ac.man.bioinf.apps.cinema.color.WhiteColorMapMetaData
All Implemented Interfaces:
ColorMapMetaData

public class WhiteColorMapMetaData
extends Object
implements ColorMapMetaData

WhiteColorMapMetaData.java Created: Fri Feb 9 13:12:26 2001

Version:
$Id: WhiteColorMapMetaData.java,v 1.2 2001/04/11 17:04:41 lord Exp $
Author:
Phillip Lord

Constructor Summary
WhiteColorMapMetaData()
           
 
Method Summary
 String getColorMapName()
          This should return the string that ColorMap instances created via this class, return as their name, via the getName method
 ColorMap getConsensusInstance(ConsensusSequence cons, JAlignmentViewer viewer)
          Returns an instance of this type for this consensus sequence
 ColorMap getInstance(SequenceAlignment alignment, JAlignmentViewer viewer)
          Returns a instance of this Color map for the given alignment instance.
 void setModule(CinemaModule module)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

WhiteColorMapMetaData

public WhiteColorMapMetaData()
Method Detail

setModule

public void setModule(CinemaModule module)
Specified by:
setModule in interface ColorMapMetaData

getColorMapName

public String getColorMapName()
Description copied from interface: ColorMapMetaData
This should return the string that ColorMap instances created via this class, return as their name, via the getName method

Specified by:
getColorMapName in interface ColorMapMetaData
Returns:
the name

getInstance

public ColorMap getInstance(SequenceAlignment alignment,
                            JAlignmentViewer viewer)
Description copied from interface: ColorMapMetaData
Returns a instance of this Color map for the given alignment instance.

Specified by:
getInstance in interface ColorMapMetaData
Returns:
the ColorMap

getConsensusInstance

public ColorMap getConsensusInstance(ConsensusSequence cons,
                                     JAlignmentViewer viewer)
Description copied from interface: ColorMapMetaData
Returns an instance of this type for this consensus sequence

Specified by:
getConsensusInstance in interface ColorMapMetaData
Parameters:
cons - the consensus sequence
Returns:
the ColorMap instance