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## Package uk.ac.man.bioinf.gui.color

Interface Summary
ColorMap | ColorMap.java The interface to support color mapping of elements in a sequence alignment.
ThreadableColorMap | ThreadableColorMap.java Defines a color map that can perform any necessary calculations to in a thread safe manner.

Class Summary
ColorGenerator | ColorGenerator.java This class generates a stream of colours, cycling through all of the colours in the list until it has finished.
ColorList | ColorList.java This class is similar to ColorGenerator, except that instead of cycling through the colours it presents them as a list Created: Thu Jun 8 17:37:23 2000
ColorStore | ColorStore.java This is a static place holder of various lists of colours.
DoubleArrayColorMap | DoubleArrayColorMap.java This class takes a series of doubles, a list of colours and a sequence alignment and turns them into a colour map.
IndividualElementColorMap | IndividualElementColorMap.java Allows a direct mapping between an element and a color; thereby every element in a sequence type will have an associated color.
PercentIDVarianceColorMap | PercentIDVarianceColorMap.java Calculates a colour scheme Created: Fri Jun 9 16:03:46 2000
SingleColorMap | SingleColorMap.java This class is designed to return one color, regardless of the element being displayed.
ThreadedColorMap | ThreadedColorMap.java This class implements the threaded functionality for ColorMap.

Exception Summary
ColorMapException | ColorMapException.java Created: Mon Apr 10 09:06:32 2000

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