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## Package uk.ac.man.bioinf.apps.cinema.io

Class Summary
AbstractSequenceInput | This class is abstract and will be extended by any sequence input modules.
AbstractSequenceInputParserExceptionHandler | AbstractSequenceInputParserExceptionHandler provides methods so that the exceptions can be stored and at a later date shown all together.
AbstractSequenceOutput | This class is abstract and will be extended by any sequence output modules.
AbstractSequenceParserExceptionHandler | AbstractSequenceInputParserExceptionHandler provides methods so that the exceptions can be stored and at a later date shown all together.
CinemaCommandLineParser | CinemaCommandLineParser.java This module is responsible for parsing the command line to Cinema and invoking what ever actions are necessary.
CinemaCommandLineParserIdentifier | The identifier for the CinemaCommandLineParser module.
FileSequenceInput | FileSequenceInput is a that module covers sequence input into Cinema via files.
FileSequenceInputParserExceptionHandler | FileSequenceInputParserExceptionHandler handles parser exceptions to do with parsing files, and will display a dialog box.
FileSequenceOutput | FileSequenceOutput is a module that covers sequence output to a file from Cinema.
FileSequenceParserExceptionHandler | FileSequenceParserExceptionHandler handles parser exceptions to do with parsing files, and will display a dialog box.
SequenceInputModuleIdentifier | A module interface identifier for sequence input.
SequenceOutputModuleIdentifier | SequenceOutputModuleIdentifier.java Created: Fri Aug 11 15:06:07 2000

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