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## Package uk.ac.man.bioinf.apps.commandline

Class Summary
CalculatePercentageID | CalculatePercentageID.java Created: Tue Jan 30 17:42:44 2001
CheckMotifLocationAgainstPrints | CheckMotifLocationAgainstPrints.java This class moves through all the SequenceAlignments in the current directory.
GappedSequenceSearch | SequenceSearch.java Searches through a SequenceAlignment specified on the command line for all occurrences of the given regexp.
SequenceSearch | SequenceSearch.java Searches through a SequenceAlignment specified on the command line for all occurrences of the given regexp.

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