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## uk.ac.man.bioinf.gui.viewer
Class JAlignmentRuler

    java.lang.Object
      |
      +--java.awt.Component
            |
            +--java.awt.Container
                  |
                  +--javax.swing.JComponent
                        |
                        +--javax.swing.JSlider
                              |
                              +--uk.ac.man.bioinf.gui.viewer.JAlignmentRuler

All Implemented Interfaces:
  Accessible, ImageObserver, MenuContainer, Serializable, SwingConstants

public class JAlignmentRuler
extends JSlider

JAlignmentRuler.java Created: Thu Mar 23 12:33:50 2000

Version:
  $Id: JAlignmentRuler.java,v 1.6 2001/04/11 17:04:42 lord Exp $
Author:
  Phillip Lord
See Also:
  Serialized Form

Nested Class Summary

Nested classes inherited from class javax.swing.JSlider
`JSlider.AccessibleJSlider`

Nested classes inherited from class javax.swing.JComponent
`JComponent.AccessibleJComponent`

Nested classes inherited from class java.awt.Container
`Container.AccessibleAWTContainer`

Nested classes inherited from class java.awt.Component
`Component.AccessibleAWTComponent, Component.BltBufferStrategy, Component.FlipBufferStrategy`

Field Summary
`protected int` | `preferredHeight`
`static String` | `uiClassID`

Fields inherited from class javax.swing.JSlider
`changeEvent, changeListener, majorTickSpacing, minorTickSpacing, orientation, sliderModel, snapToTicks`

Fields inherited from class javax.swing.JComponent
`accessibleContext, listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW`

Fields inherited from class java.awt.Component
`BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT`

Fields inherited from interface javax.swing.SwingConstants
`BOTTOM, CENTER, EAST, HORIZONTAL, LEADING, LEFT, NEXT, NORTH, NORTH_EAST, NORTH_WEST, PREVIOUS, RIGHT, SOUTH, SOUTH_EAST, SOUTH_WEST, TOP, TRAILING, VERTICAL, WEST`

Fields inherited from interface java.awt.image.ImageObserver
`ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH`

Constructor Summary
`JAlignmentRuler()`
`JAlignmentRuler(SequenceAlignment seq)`
`JAlignmentRuler(SequenceAlignment seq, int orientation)`
`JAlignmentRuler(SequenceAlignment seq, int orientation, int widthPerBase)`

Method Summary
`Dimension` | `getMaximumSize()`
`Dimension` | `getMinimumSize()`
`int` | `getPreferredHeight()`
`int` | `getPreferredWidthPerBase()`
`SequenceAlignment` | `getSequenceAlignment()`
`String` | `getUIClassID()`
`void` | `setPreferredWidthPerBase(int widthPerBase)`
`void` | `setSequenceAlignment(SequenceAlignment msa)`
`void` | `setUI(SliderUI ui)`
`void` | `updateUI()`

Methods inherited from class javax.swing.JSlider
`addChangeListener, createChangeListener, createStandardLabels, createStandardLabels, fireStateChanged, getAccessibleContext, getChangeListeners, getExtent, getInverted, getLabelTable, getMajorTickSpacing, getMaximum, getMinimum, getMinorTickSpacing, getModel, getOrientation, getPaintLabels, getPaintTicks, getPaintTrack, getSnapToTicks, getUI, getValue, getValueIsAdjusting, paramString, removeChangeListener, setExtent, setInverted, setLabelTable, setMajorTickSpacing, setMaximum, setMinimum, setMinorTickSpacing, setModel, setOrientation, setPaintLabels, setPaintTicks, setPaintTrack, setSnapToTicks, setValue, setValueIsAdjusting, updateLabelUIs`

Methods inherited from class javax.swing.JComponent
`addAncestorListener, addNotify, addPropertyChangeListener, addPropertyChangeListener, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBorder, getBounds, getClientProperty, getComponentGraphics, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getGraphics, getHeight, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getNextFocusableComponent, getPreferredSize, getPropertyChangeListeners, getPropertyChangeListeners, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isMaximumSizeSet, isMinimumSizeSet, isOpaque, isOptimizedDrawingEnabled, isPaintingTile, isPreferredSizeSet, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removePropertyChangeListener, removePropertyChangeListener, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFont, setForeground, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update`

Methods inherited from class java.awt.Container
`add, add, add, add, add, addContainerListener, addImpl, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setFocusCycleRoot, setFocusTraversalKeys, setFocusTraversalPolicy, setLayout, transferFocusBackward, transferFocusDownCycle, validate, validateTree`

Methods inherited from class java.awt.Component
`action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMouseWheelListeners, getName, getParent, getPeer, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusUpCycle`

Methods inherited from class java.lang.Object
`clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait`

Field Detail

### uiClassID

    public static final String uiClassID

See Also:
  Constant Field Values

### preferredHeight

    protected int preferredHeight

Constructor Detail

### JAlignmentRuler

    public JAlignmentRuler()

### JAlignmentRuler

    public JAlignmentRuler(SequenceAlignment seq)

### JAlignmentRuler

    public JAlignmentRuler(SequenceAlignment seq,
                           int orientation)

### JAlignmentRuler

    public JAlignmentRuler(SequenceAlignment seq,
                           int orientation,
                           int widthPerBase)

Method Detail

### setSequenceAlignment

    public void setSequenceAlignment(SequenceAlignment msa)

### getSequenceAlignment

    public SequenceAlignment getSequenceAlignment()

### getMinimumSize

    public Dimension getMinimumSize()

  Overrides:
    `getMinimumSize` in class `JComponent`

### getMaximumSize

    public Dimension getMaximumSize()

  Overrides:
    `getMaximumSize` in class `JComponent`

### getPreferredHeight

    public int getPreferredHeight()

### getPreferredWidthPerBase

    public int getPreferredWidthPerBase()

### setPreferredWidthPerBase

    public void setPreferredWidthPerBase(int widthPerBase)

### getUIClassID

    public String getUIClassID()

  Overrides:
    `getUIClassID` in class `JSlider`

### setUI

    public void setUI(SliderUI ui)

  Overrides:
    `setUI` in class `JSlider`

### updateUI

    public void updateUI()

  Overrides:
    `updateUI` in class `JSlider`

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