Package uk.ac.man.bioinf.gui.color

Interface Summary
ColorMap ColorMap.java The interface to support color mapping of elements in a sequence alignment.
ThreadableColorMap ThreadableColorMap.java Defines a color map that can perform any necessary calculations to in a thread safe manner.
 

Class Summary
ColorGenerator ColorGenerator.java This class generates a stream of colours, cycling through all of the colours in the list until it has finished.
ColorList ColorList.java This class is similar to ColorGenerator, except that instead of cycling through the colours it presents them as a list Created: Thu Jun 8 17:37:23 2000
ColorStore ColorStore.java This is a static place holder of various lists of colours.
DoubleArrayColorMap DoubleArrayColorMap.java This class takes a series of doubles, a list of colours and a sequence alignment and turns them into a colour map.
IndividualElementColorMap IndividualElementColorMap.java Allows a direct mapping between an element and a color; thereby every element in a sequence type will have an associated color.
PercentIDVarianceColorMap PercentIDVarianceColorMap.java Calculates a colour scheme Created: Fri Jun 9 16:03:46 2000
SingleColorMap SingleColorMap.java This class is designed to return one color, regardless of the element being displayed.
ThreadedColorMap ThreadedColorMap.java This class implements the threaded functionality for ColorMap.
 

Exception Summary
ColorMapException ColorMapException.java Created: Mon Apr 10 09:06:32 2000