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## uk.ac.man.bioinf.gui.color
Interface ColorMap

All Known Subinterfaces:
  ThreadableColorMap

All Known Implementing Classes:
  ConsensusPercentageIDColorMap, DoubleArrayColorMap, IndividualElementColorMap, PercentIDVarianceColorMap, SingleColorMap, ThreadedColorMap

public interface ColorMap

ColorMap.java The interface to support color mapping of elements in a sequence alignment. NB: Objects of this type should be immutable. Created: Thu Mar 23 18:32:32 2000

Version:
  $Id: ColorMap.java,v 1.4 2001/04/11 17:04:42 lord Exp $
Author:
  J Selley

Method Summary
`Color` | `getColorAt(SequenceAlignment sa, Element elem, SequenceAlignmentPoint point)` Returns the Color at a specific position in the alignment.
`String` | `getName()` Returns the name of this colour scheme.

Method Detail

### getColorAt

    public Color getColorAt(SequenceAlignment sa,
                            Element elem,
                            SequenceAlignmentPoint point)

  Returns the Color at a specific position in the alignment. This method will do various things depending on the actual color map implemented.

  Parameters:
    `sa` - the sequence alignment
    `elem` - the element
    `point` - the location within the SA
  Returns:
    the color

### getName

    public String getName()

  Returns the name of this colour scheme.

  Returns:
    the name

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