Package uk.ac.man.bioinf.sequence.geom

Interface Summary
SequenceAlignmentShape SequenceAlignmentShape.java Defines a shape used to identify a region in a sequence alignment.
 

Class Summary
SequenceAlignmentDimension SequenceAlignmentDimension.java Represents a dimension within a SA.
SequenceAlignmentPoint SequenceAlignmentPoint.java Represents a point in an alignment, where X is the position in a sequence, and Y is the index of the sequence in the alignment.
SequenceAlignmentRectangle SequenceAlignmentRectangle.java Defines a rectangular region in a sequence alignment.