Package uk.ac.man.bioinf.gui.viewer

Interface Summary
AlignmentSelectionModel AlignmentSelectionModel.java This defines the selection model for the JAlignmentViewer.
AlignmentSelectionRenderer SelectionRenderer.java Created: Wed Mar 7 18:45:50 2001
AlignmentViewerCellRenderer AlignmentViewerCellRenderer.java Initial interface for the AlignmentViewerCellRender.
FastAlignmentViewerCellRenderer FastAlignmentViewerCellRenderer.java Although the JAlignmentViewer provides a pluggable renderer architecture with the AlignmentViewerCellRenderer it has been found that this has a fairly disasterous effect on performance of the viewer particularly with respect to scrolling, due to the large number of method calls and events to render a cell.
SequenceCursor SequenceCursor.java Created: Mon Apr 3 18:59:26 2000
 

Class Summary
BorderFastAlignmentViewerCellRenderer BorderFastAlignmentViewerCellRenderer.java One of three classes designed to render cells in the JAlignmentViewer.
ButtonViewerPopupMenu ButtonViewerPopupMenu.java This class implements a pop up menu for the JAlignmentButtonPanel.
ColorFastAlignmentViewerCellRenderer ColorFastAlignmentViewerCellRenderer.java One of three classes designed to render cells in the JAlignmentViewer.
CursorLessFastAlignmentViewerCellRenderer CursorLessFastAlignmentViewerCellRenderer.java Created: Thu Jul 13 17:59:36 2000
DefaultAlignmentSelectionRenderer DefaultAlignmentSelectionRenderer.java Created: Wed Mar 7 18:59:56 2001
DefaultAlignmentViewerCellRenderer DefaultAlignmentViewerCellRenderer.java Created: Mon Mar 20 20:23:12 2000
DefaultFastAlignmentViewerCellRenderer DefaultFastAlignmentViewerCellRenderer.java Created: Mon Apr 17 20:11:46 2000
DefaultSequenceCursor DefaultSequenceCursor.java Created: Tue Apr 4 12:49:30 2000
Install Install.java This class provides the install information for the all of the classes in the viewer package.
InvertedScrollPaneLayout InvertedScrollPaneLayout.java Created: Fri Mar 31 14:27:41 2000
JAlignmentButtonPanel JAlignmentButtonPanel.java This component provides a rank of Buttons relating to a SequenceAlignment.
JAlignmentRuler JAlignmentRuler.java Created: Thu Mar 23 12:33:50 2000
JAlignmentViewer JAlignmentViewer.java Created: Tue Mar 14 16:28:59 2000
JChangedScrollPane JChangedScrollPane.java Created: Fri Mar 31 14:56:45 2000
JLayableScrollPane JLayableScrollPane.java You cant reset the layout manager on a scroll pane, due to what appears to be a bug in the JScrollPane layout, at least not it you want anything to appear on screen.
MultiplexerFastAlignmentViewerCellRenderer MultiplexerFastAlignmentViewerCellRenderer.java This multiplexer uses three other cell renderers to render the cell.
NullAlignmentSelectionModel NullAlignmentSelectionModel.java Trivial selection model.
PrintableAlignmentPanel PrintableAlignmentPanel.java Created: Fri Mar 9 20:00:24 2001
PrintableJAlignmentViewer PrintableJAlignmentViewer.java A JAlignmentViewer which can be used to print Created: Fri Mar 9 17:21:44 2001
SingleAlignmentSelectionModel SingleAlignmentSelectionModel.java Created: Mon Apr 10 11:59:44 2000
TextFastAlignmentViewerCellRenderer TextFastAlignmentViewerCellRenderer.java One of three classes designed to render cells in the JAlignmentViewer.
 

Exception Summary
ReadonlyException ReadonlyException.java Created: Thu Dec 14 15:40:59 2000