uk.ac.man.bioinf.analysis.consensus
Class PercentageIDConsensus
java.lang.Object
|
+--uk.ac.man.bioinf.analysis.consensus.PercentageIDConsensus
- All Implemented Interfaces:
- ConsensusCalculator
- public class PercentageIDConsensus
- extends Object
- implements ConsensusCalculator
PercentageIDConsensus.java
Calculates a consensus sequence based simply on which element is
most frequent at that row. If there are several possibilities it
just takes which ever one came first.
Created: Thu Jun 15 18:06:30 2000
- Version:
- $Id: PercentageIDConsensus.java,v 1.10 2001/04/11 17:04:41 lord Exp $
- Author:
- Phillip Lord
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
NAME
public static final String NAME
- See Also:
- Constant Field Values
PercentageIDConsensus
public PercentageIDConsensus(PercentageIDCalculator calc)
getCurrentConsensus
public GappedSequence getCurrentConsensus()
- Specified by:
getCurrentConsensus
in interface ConsensusCalculator
getCalculatorName
public String getCalculatorName()
- Specified by:
getCalculatorName
in interface ConsensusCalculator
getSequenceAlignment
public SequenceAlignment getSequenceAlignment()
- Specified by:
getSequenceAlignment
in interface ConsensusCalculator