uk.ac.man.bioinf.analysis.consensus
Interface ConsensusSequence

All Superinterfaces:
GappedSequence, Identifiable, MutableSequence, Sequence, SequenceEventProvider
All Known Implementing Classes:
DefaultConsensusSequence

public interface ConsensusSequence
extends GappedSequence

ConsensusSequence.java Created: Thu Jun 15 15:32:13 2000

Version:
$Id: ConsensusSequence.java,v 1.4 2001/04/11 17:04:41 lord Exp $
Author:
Phillip Lord

Method Summary
 void destroy()
           
 ConsensusCalculator getConsensusCalculator()
           
 void setConsensusCalculator(ConsensusCalculator calc)
           
 
Methods inherited from interface uk.ac.man.bioinf.sequence.alignment.GappedSequence
deleteGapAt, deleteGapAt, getGappedElementAt, getGappedElementAtAsChar, getGappedLength, getGappedPositionOf, getGappedSequenceAsChars, getGappedSequenceAsElements, getGappedSubSequence, getUngappedPositionOf, insertGapAt, insertGapAt
 
Methods inherited from interface uk.ac.man.bioinf.sequence.Sequence
getElementAt, getElementAtAsChar, getLength, getSequenceAsChars, getSequenceAsElements, getSequenceType, getSubSequence
 
Methods inherited from interface uk.ac.man.bioinf.sequence.identifier.Identifiable
getIdentifier
 
Methods inherited from interface uk.ac.man.bioinf.sequence.event.SequenceEventProvider
addSequenceListener, addVetoableSequenceListener, removeSequenceListener, removeVetoableSequenceListener
 

Method Detail

setConsensusCalculator

public void setConsensusCalculator(ConsensusCalculator calc)

getConsensusCalculator

public ConsensusCalculator getConsensusCalculator()

destroy

public void destroy()