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java.lang.Object | +--uk.ac.man.bioinf.apps.cinema.color.WhiteColorMapMetaData
WhiteColorMapMetaData.java Created: Fri Feb 9 13:12:26 2001
Constructor Summary | |
WhiteColorMapMetaData()
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Method Summary | |
String |
getColorMapName()
This should return the string that ColorMap instances created via this class, return as their name, via the getName method |
ColorMap |
getConsensusInstance(ConsensusSequence cons,
JAlignmentViewer viewer)
Returns an instance of this type for this consensus sequence |
ColorMap |
getInstance(SequenceAlignment alignment,
JAlignmentViewer viewer)
Returns a instance of this Color map for the given alignment instance. |
void |
setModule(CinemaModule module)
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Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
public WhiteColorMapMetaData()
Method Detail |
public void setModule(CinemaModule module)
setModule
in interface ColorMapMetaData
public String getColorMapName()
ColorMapMetaData
getColorMapName
in interface ColorMapMetaData
public ColorMap getInstance(SequenceAlignment alignment, JAlignmentViewer viewer)
ColorMapMetaData
getInstance
in interface ColorMapMetaData
public ColorMap getConsensusInstance(ConsensusSequence cons, JAlignmentViewer viewer)
ColorMapMetaData
getConsensusInstance
in interface ColorMapMetaData
cons
- the consensus sequence
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