Workshop Proceedings Papers

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[1] J. Blakes, O. Raz, N. Krasnogor, and E. Shapiro. A new algorithm for combinatorial dna library assembly. In M. Galdzicki, editor, 5th International Workshop on Bio-Design Automation (IWBDA 2013), 2013. [ bib | .pdf | .pdf ]
[2] E. Glaab, A. Baudot, N. Krasnogor, and A. Valencia. Extending pathways and processes using molecular interaction networks to analyse cancer genome data. In RECOMB Computational Cancer Biology, volume (to appear), 2010. [ bib ]
[3] G. Terrazas, D. Landa-Silva, and N. Krasnogor. Discovering beneficial cooperative structures for the automated construction of heuristics. In Nature Inspired Cooperative Strategies for Optimisation (NICSO), volume 284 of Studies in Computational Intelligence, page 89100. Springer, 2010. [ bib | http ]
[4] P. Widera, J. Bacardit, N. Krasnogor, C. Garcia-Martinez, and M. Lozano. Evolutionary symbolic discovery for bioinformatics, systems and synthetic biology. In GECCO '10: Proceedings of the 12th annual conference comp on Genetic and evolutionary computation, pages 1991-1998. ACM, 2010. [ bib | DOI | .pdf ]
[5] J. Bacardit and N. Krasnogor. Empirical evaluation of ensemble techniques for a pitssburgh learning classifier system. In Proceedings of the 2006 International Workshop on Learning Classifier Systems. Lectuire Notes in Computer Science., volume 4998/2008 of Lecture Notes in Computer Science, pages 255-268. Springer, 2008. [ bib | DOI | .pdf ]
[6] F.J. Romero-Campero, J. Twycross, M. Bennett, M. Camara, and N. Krasnogor. Modular assembly of cell systems biology models using p systems. In Proceedings of the Prague International Workshop on Membrane Computing, volume (to appear) of Lecture Notes in Computer Science. Springer, 2008. [ bib | .pdf ]
[7] F.J. Romero-Campero, J. Twycross, H. Cao, J. Blakes, and N. Krasnogor. A multiscale modelling framework based on p systems. In Proceedings of the Workshop on Membrane Computing (WMC9). Lecture Notes in Computer Science, number 5391. Springer, 2008. [ bib | .pdf ]
[8] G. Folino, A.A. Shah, D. Barthel, and N. Krasnogor. Towards a distributed framework for protein (structure) comparison, knowledge, similarity and information (procksi). In UK E-Science all-hands Meeting, 2008. [ bib | .pdf | .pdf ]
[9] G. Gutin, D. Karapetyan, and N. Krasnogor. Memetic algorithm for the generalized asymmetric traveling salesman problem. In M. Pavone, G. Nicosia, D.A. Pelta, and N. Krasnogor, editors, Proceedings of the 2007 Workshop On Nature Inspired Cooperative Strategies for Optimisation. Lecture Notes in Computer Science (LNCS), volume 129/2008 of Lecture Notes in Computer Science, pages 199-210. Springer, 2008. [ bib | DOI | .pdf ]
[10] A.A. Shah, G. Folino, D. Barthel, and N. Krasnogor. Performance evaluation of protein (structure) comparison algorithms under integrated resource environemnt for mpi jobs. In IEEE International Symposium on Parallel and Distributed Processing with Applications, pages 817-822. IEEE, 2008. [ bib | DOI ]
[11] M. Tabacman, J. Bacardit, I. Loiseau, and N. Krasnogor. Learning classifier systems in optimisation problems: a case study on fractal travelling salesman problems. In Proceedings of the International Workshop on Learning Classifier Systems, volume (to appear) of Lecture Notes in Computer Science. Springer, 2008. [ bib | .pdf ]
[12] L. Li, N. Krasnogor, and J. Garibaldi. Automated self-assembly programming paradigm: A particle swarm realization. In N. Krasnogor and D.A. Pelta, editors, Proceedings of the Workshop on Nature Inspired Cooperative Strategies for Optimisation. University of Granada Publisher, 2006. [ bib | .pdf ]
[13] P. Siepmann, C.P. Martin, N. Krasnogor, and P. Moriarty. A genetic algorithm approach to guiding the evolution of self-organised nanostructured systems. In Condensed Matter and Materials Physics, 2006. [ bib ]
[14] F. Bernardini, M. Gheorghe, N. Krasnogor, R.C. Muniyandi, M.J. Perez-Jim'enez, and F.J. Romero-Campero. On p systems as a modelling tool for biological systems. In R. Freund, G. Paun, and G. Rozenberg Arto Salomaa, editors, Workshop on Membrane Computing. Lecture Notes in Computer Science 3850, Lecture Notes in Computer Science 3850, pages 114-133. Springer, 2005. [ bib | DOI ]
[15] R. Krasnogor and N. Krasnogor. Advances in artificial life - impacts in human life. In Proceedings of the Czech-Argentine Biennale Workshop "e-Golems" - Interdisciplinary Aspects of Human-Machine Co-existence and Co-operation. World IFAC, Czech Technical University in Prague, 2005, CTU Press, Prague 7/2005 , ISBN: 80-01-03275-2, 2005. [ bib | .PDF ]
[16] N. Krasnogor. Using polynomial local search and kolmogorov complexities to better understand evolutionary algorithms. In DIMACS Workshop on Complexity and Inference, NJ, USA, June 2003. [ bib | .pdf ]
[17] N. Krasnogor and S. Gustafson. The local searcher as a supplier of building blocks in self-generating memetic algorithms. In Fourth International Workshop on Memetic Algorithms (WOMA4). In GECCO 2003, Chicago, USA, 2003. [ bib | .pdf ]
[18] N. Krasnogor. Multimeme algorithms for the structure prediction and structure comparison of proteins. In Workshop on Biological Applications of Evolutionary Computation, GECCO 2002, New York, USA, July 2002. GECCO. [ bib | .pdf ]
[19] N. Krasnogor and S. Gustafson. Toward truly "memetic" memetic algorithms: discussion and proofs of concept. In Advances in Nature-Inspired Computation: The PPSN VII Workshops., volume 16(52). PEDAL (Parallel, Emergent and Distributed Architectures Lab), 2002. [ bib ]
[20] N. Krasnogor and J. Smith. Mafra: A java memetic algorithms framework. In A.S. Wu, editor, Workshops Proceedings of the 2000 International Genetic and Evolutionary Computation Conference (GECCO2000), 2000. [ bib | .pdf ]
[21] N. Krasnogor. Coevolution of genes and memes in memetic algorithms. In A.S. Wu, editor, Proceedings of the 1999 Genetic and Evolutionary Computation Conference Workshop Program, 1999. (poster). [ bib | .pdf ]
[22] N. Krasnogor, D. Pelta, P. E. Martinez Lopez, and E. de la Canal. Simple models of protein folding and a memetic crossover. In Computer Science and Operations Research: Recent Advances in the Interface, Monterey, CA, 1998. [ bib | .pdf ]
[23] N. Krasnogor, D. Pelta, P. E. Martinez Lopez, and E. de la Canal. Estudios de los mecanismos de crossover en el problema de replegado de proteinas. In Turbo Evaluation and Rapid Algorithms, 1997. [ bib | .pdf ]
[24] P. Moscato, N. Krasnogor, and M.G. Norman. Delaunay and voronoi help trucks and salesmen. In 2nd Researchers Meeting of the Montevideo Group, Salto Grande, Uruguay, 1994. [ bib ]

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